< Back to small molecule database

BDBM758202

E3L040251
Internal ID: BDB040251
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB040251/BDB040251.sdf
Basic Properties
Compound ID
E3L040251
Internal ID
BDB040251
Molecular formula
C28H26F7N5O2
Molecular weight
597.535000
Exact mass
597.197473
XLogP
5.0198
TPSA
74.4900
HBA / HBD
5 / 1
Rotatable bonds
6
Heavy atoms / rings
42 / 6
Activity summary
IC50 unknown 490.00000000 nM
1 activity record(s) imported
InChIKey
RVYUYDXKZBQAFA-UHFFFAOYSA-N
SMILES
Cn1cnnc1C(F)(F)C1(c2cccc(N3Cc4c(cc(CN5CC(C)(O)C5)cc4C(F)(F)F)C3=O)c2)CC(F)(F)C1
Aliases
BDBM758202 (preferred) BDBM758202 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM758202 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM758202 Open - 10.7270/Q22N572G
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1cnnc1C(F)(F)C1(c2cccc(N3Cc4c(cc(CN5CC(C)(O)C5)cc4C(F)(F)F)C3=O)c2)CC(F)(F)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB040251/BDB040251.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB040251/BDB040251.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB040251/BDB040251.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB040251/BDB040251.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB040251/BDB040251.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component 		BindingDB:BDBM758202 IC50 490 nM Moderate DOI: 10.7270/Q22N572G 1