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BDBM758212

E3L040261
Internal ID: BDB040261
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB040261/BDB040261.sdf
Basic Properties
Compound ID
E3L040261
Internal ID
BDB040261
Molecular formula
C24H21F6N5O
Molecular weight
509.454000
Exact mass
509.165030
XLogP
4.8307
TPSA
77.0400
HBA / HBD
4 / 1
Rotatable bonds
5
Heavy atoms / rings
36 / 5
Activity summary
IC50 unknown 130.00000000 nM
1 activity record(s) imported
InChIKey
DPCJUQMGMACDFZ-IBGZPJMESA-N
SMILES
Cn1cnnc1[C@H](F)C1(c2cccc(N3Cc4c(cc(CN)cc4C(F)(F)F)C3=O)c2)CC(F)(F)C1
Aliases
BDBM758212 (preferred) (R)-6-(aminomethyl)-2-(3-(3,3-difluoro-1-(fluoro(4-methyl-4H-1,2,4-triazol-3-yl)methyl)cyclobutyl)phenyl)-4-(trifluoromethyl)isoindolin-1-one formate (source_name) BDBM758212 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM758212 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM758212 Open - 10.7270/Q22N572G
PubChem CID164869193 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1cnnc1[C@H](F)C1(c2cccc(N3Cc4c(cc(CN)cc4C(F)(F)F)C3=O)c2)CC(F)(F)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB040261/BDB040261.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB040261/BDB040261.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB040261/BDB040261.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB040261/BDB040261.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB040261/BDB040261.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component 		BindingDB:BDBM758212 IC50 130 nM Moderate DOI: 10.7270/Q22N572G 1