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US20250257055, Example 16

E3L040668
Internal ID: BDB040668
Activity data available Local docking-ready structure
Dock with Q09472
Structure
/e3_file/ligand_db/generated/BDB040668/BDB040668.sdf
Basic Properties
Compound ID
E3L040668
Internal ID
BDB040668
Molecular formula
C29H27F5N6O3
Molecular weight
602.564000
Exact mass
602.206480
XLogP
3.3339
TPSA
90.7800
HBA / HBD
5 / 1
Rotatable bonds
6
Heavy atoms / rings
43 / 6
Activity summary
IC50 unknown 54.00000000 nM
1 activity record(s) imported
InChIKey
FMIRMIPUPDECHV-NDEPHWFRSA-N
SMILES
CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(CCc4cc(-c5cnn(C)c5F)ccc43)C2=O)(C(F)(F)F)C1
Aliases
BDBM764579 (preferred) US20250257055, Example 16 (source_name) BDBM764579 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q09472 EP300;P300
Histone acetyltransferase p300		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM764579 medium
; target=Histone acetyltransferase p300
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM764579 Open - 10.7270/Q2542TC5
PubChem CID176861997 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CN1CC(N(Cc2ccc(F)cc2)C(=O)CN2C(=O)N[C@]3(CCc4cc(-c5cnn(C)c5F)ccc43)C2=O)(C(F)(F)F)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB040668/BDB040668.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB040668/BDB040668.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB040668/BDB040668.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB040668/BDB040668.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB040668/BDB040668.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Histone acetyltransferase p300
Q09472
E3 ligase component 		BindingDB:BDBM764579 IC50 54 nM High DOI: 10.7270/Q2542TC5 1