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BDBM765819

E3L040732
Internal ID: BDB040732
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB040732/BDB040732.sdf
Basic Properties
Compound ID
E3L040732
Internal ID
BDB040732
Molecular formula
C23H29F2N3O5
Molecular weight
465.497000
Exact mass
465.207527
XLogP
2.7459
TPSA
96.9700
HBA / HBD
6 / 2
Rotatable bonds
5
Heavy atoms / rings
33 / 4
Activity summary
Ki < 100.00000000 nM
1 activity record(s) imported
InChIKey
NJDVYXYHSOWWOV-XYPWUTKMSA-N
SMILES
CC(C)(C)O[C@H]1C[C@@H](OC(=O)NC2CN(c3cc(F)c(C4CCC(=O)NC4=O)c(F)c3)C2)C1
Aliases
BDBM765819 (preferred) BDBM765819 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM765819 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM765819 Open - 10.7270/Q2DJ5MDK
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)(C)O[C@H]1C[C@@H](OC(=O)NC2CN(c3cc(F)c(C4CCC(=O)NC4=O)c(F)c3)C2)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB040732/BDB040732.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB040732/BDB040732.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB040732/BDB040732.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB040732/BDB040732.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB040732/BDB040732.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM765819 Ki <100 nM High DOI: 10.7270/Q2DJ5MDK 1