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BDBM765881

E3L040794
Internal ID: BDB040794
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB040794/BDB040794.sdf
Basic Properties
Compound ID
E3L040794
Internal ID
BDB040794
Molecular formula
C26H28F2N6O5
Molecular weight
542.543000
Exact mass
542.208924
XLogP
2.0438
TPSA
124.1800
HBA / HBD
7 / 2
Rotatable bonds
5
Heavy atoms / rings
39 / 5
Activity summary
Ki < 100.00000000 nM
1 activity record(s) imported
InChIKey
NBUUIHBIMMGTJN-UHFFFAOYSA-N
SMILES
Cc1ccc(N(C)C(=O)N2CC(OC(=O)NC3CN(c4cc(F)c(C5CCC(=O)NC5=O)c(F)c4)C3)C2)cn1
Aliases
BDBM765881 (preferred) [1-[methyl-(6-methyl-3-pyridinyl)carbamoyl]azetidin-3-yl] N-[1-[4-(2,6-dioxopiperidin-3-yl)-3,5-difluorophenyl]azetidin-3-yl]carbamate (source_name) BDBM765881 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM765881 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM765881 Open - 10.7270/Q2DJ5MDK
PubChem CID171541195 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ccc(N(C)C(=O)N2CC(OC(=O)NC3CN(c4cc(F)c(C5CCC(=O)NC5=O)c(F)c4)C3)C2)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB040794/BDB040794.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB040794/BDB040794.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB040794/BDB040794.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB040794/BDB040794.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB040794/BDB040794.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component 		BindingDB:BDBM765881 Ki <100 nM High DOI: 10.7270/Q2DJ5MDK 1