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US12409171, Name RG-0013839

E3L040931
Internal ID: BDB040931
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB040931/BDB040931.sdf
Basic Properties
Compound ID
E3L040931
Internal ID
BDB040931
Molecular formula
C31H26F4N4O4
Molecular weight
594.565000
Exact mass
594.189018
XLogP
5.3903
TPSA
93.5300
HBA / HBD
5 / 1
Rotatable bonds
7
Heavy atoms / rings
43 / 5
Activity summary
EC50 unknown 116.00000000 nM
1 activity record(s) imported
InChIKey
OZDLITPXUDZLHL-BDYUSTAISA-N
SMILES
CCN1C(=O)[C@@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@@H](c2ccc(F)cc2)c2c(COC(C)=O)nn(-c3ccccc3)c21
Aliases
BDBM768482 (preferred) US12409171, Name RG-0013839 (source_name) BDBM768482 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM768482 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM768482 Open - 10.7270/Q2MW2NXW
PubChem CID155424401 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCN1C(=O)[C@@H](NC(=O)c2cccc(C(F)(F)F)c2)[C@@H](c2ccc(F)cc2)c2c(COC(C)=O)nn(-c3ccccc3)c21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB040931/BDB040931.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB040931/BDB040931.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB040931/BDB040931.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB040931/BDB040931.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB040931/BDB040931.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM768482 EC50 116 nM Moderate DOI: 10.7270/Q2MW2NXW 1