< Back to small molecule database

US12409171, Regno SJ000399617

E3L041045
Internal ID: BDB041045
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB041045/BDB041045.sdf
Basic Properties
Compound ID
E3L041045
Internal ID
BDB041045
Molecular formula
C23H22Cl2N4O4
Molecular weight
489.359000
Exact mass
488.101811
XLogP
3.9351
TPSA
94.4800
HBA / HBD
5 / 2
Rotatable bonds
5
Heavy atoms / rings
33 / 4
Activity summary
IC50 > 68.00000000 nM
1 activity record(s) imported
InChIKey
PGIWPEVINZXEAK-UXHICEINSA-N
SMILES
COc1ccc(C(=O)N[C@@H]2C(=O)Nc3c(c(C)nn3C)[C@H]2c2ccc(Cl)c(Cl)c2)cc1OC
Aliases
BDBM768596 (preferred) US12409171, Regno SJ000399617 (source_name) BDBM768596 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM768596 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM768596 Open - 10.7270/Q2MW2NXW
PubChem CID135558191 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1ccc(C(=O)N[C@@H]2C(=O)Nc3c(c(C)nn3C)[C@H]2c2ccc(Cl)c(Cl)c2)cc1OC keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041045/BDB041045.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041045/BDB041045.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041045/BDB041045.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041045/BDB041045.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041045/BDB041045.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component
BindingDB:BDBM768596 IC50 >68 nM Uncertain DOI: 10.7270/Q2MW2NXW 1