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US20250289799, Example 154

E3L041193
Internal ID: BDB041193
Activity data available Local docking-ready structure
Dock with Q8TAF3
Structure
/e3_file/ligand_db/generated/BDB041193/BDB041193.sdf
Basic Properties
Compound ID
E3L041193
Internal ID
BDB041193
Molecular formula
C25H23F3N6O
Molecular weight
480.494000
Exact mass
480.188544
XLogP
5.5496
TPSA
77.7500
HBA / HBD
6 / 1
Rotatable bonds
7
Heavy atoms / rings
35 / 5
Activity summary
IC50 unknown 6.20000000 nM
1 activity record(s) imported
InChIKey
GGMRHCFMLKXRKU-UHFFFAOYSA-N
SMILES
COc1cnc(-c2cccnc2C2CC2)nc1NCc1ccc(-n2nc(C(F)(F)F)cc2C)cc1
Aliases
BDBM771994 (preferred) US20250289799, Example 154 (source_name) BDBM771994 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q8TAF3 WDR48;KIAA1449;UAF1
WD repeat-containing protein 48		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM771994 medium
; target=Ubiquitin carboxyl-terminal hydrolase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM771994 Open - 10.7270/Q2KS6X99
PubChem CID176244151 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cnc(-c2cccnc2C2CC2)nc1NCc1ccc(-n2nc(C(F)(F)F)cc2C)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041193/BDB041193.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041193/BDB041193.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041193/BDB041193.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041193/BDB041193.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041193/BDB041193.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Ubiquitin carboxyl-terminal hydrolase 1
Q8TAF3
E3 ligase component 		BindingDB:BDBM771994 IC50 6.2 nM Very high DOI: 10.7270/Q2KS6X99 1