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US20250289799, Example 182

E3L041221
Internal ID: BDB041221
Activity data available Local docking-ready structure
Dock with Q8TAF3
Structure
/e3_file/ligand_db/generated/BDB041221/BDB041221.sdf
Basic Properties
Compound ID
E3L041221
Internal ID
BDB041221
Molecular formula
C25H24F3N7O2
Molecular weight
511.508000
Exact mass
511.194358
XLogP
5.8008
TPSA
95.8200
HBA / HBD
7 / 1
Rotatable bonds
7
Heavy atoms / rings
37 / 5
Activity summary
IC50 unknown 7.40000000 nM
1 activity record(s) imported
InChIKey
GXVWXLQYZCEQPF-UHFFFAOYSA-N
SMILES
COc1cnn(C(C)C)c1-c1nc(NCc2ccc(-n3nc(C(F)(F)F)cc3C)cc2)c2occc2n1
Aliases
BDBM772022 (preferred) US20250289799, Example 182 (source_name) BDBM772022 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q8TAF3 WDR48;KIAA1449;UAF1
WD repeat-containing protein 48		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM772022 medium
; target=Ubiquitin carboxyl-terminal hydrolase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM772022 Open - 10.7270/Q2KS6X99
PubChem CID176244152 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cnn(C(C)C)c1-c1nc(NCc2ccc(-n3nc(C(F)(F)F)cc3C)cc2)c2occc2n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041221/BDB041221.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041221/BDB041221.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041221/BDB041221.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041221/BDB041221.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041221/BDB041221.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Ubiquitin carboxyl-terminal hydrolase 1
Q8TAF3
E3 ligase component 		BindingDB:BDBM772022 IC50 7.4 nM Very high DOI: 10.7270/Q2KS6X99 1