< Back to small molecule database

BDBM774958

E3L041531
Internal ID: BDB041531
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB041531/BDB041531.sdf
Basic Properties
Compound ID
E3L041531
Internal ID
BDB041531
Molecular formula
C33H38F3N7O3
Molecular weight
637.707000
Exact mass
637.298823
XLogP
5.0589
TPSA
109.4000
HBA / HBD
8 / 0
Rotatable bonds
9
Heavy atoms / rings
46 / 6
Activity summary
IC50 unknown 3.00000000 nM
1 activity record(s) imported
InChIKey
UPKGLDGEWIPCJY-LWAJAQLZSA-N
SMILES
CC(C)C(C#N)Oc1cc(C2(Cc3nncn3C)COC2)cc(N2Cc3c(cc(CN4CCC[C@H](C)C4)cc3C(F)(F)F)C2=O)n1
Aliases
BDBM774958 (preferred) BDBM774958 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B
reported_binder bindingdb_reported Yes No low BindingDB:BDBM774958 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM774958 Open - 10.7270/Q26D5ZSD
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)C(C#N)Oc1cc(C2(Cc3nncn3C)COC2)cc(N2Cc3c(cc(CN4CCC[C@H](C)C4)cc3C(F)(F)F)C2=O)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041531/BDB041531.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041531/BDB041531.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041531/BDB041531.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041531/BDB041531.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041531/BDB041531.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component
BindingDB:BDBM774958 IC50 3 nM Very high DOI: 10.7270/Q26D5ZSD 1