< Back to small molecule database

BDBM775013

E3L041586
Internal ID: BDB041586
Activity data available Local docking-ready structure
Dock with Q13191
Structure
/e3_file/ligand_db/generated/BDB041586/BDB041586.sdf
Basic Properties
Compound ID
E3L041586
Internal ID
BDB041586
Molecular formula
C32H37F3N10O2
Molecular weight
650.710000
Exact mass
650.305305
XLogP
5.3851
TPSA
137.1700
HBA / HBD
8 / 1
Rotatable bonds
9
Heavy atoms / rings
47 / 7
Activity summary
IC50 unknown 12.00000000 nM
2 activity record(s) imported
InChIKey
HJVURMHVOMFFMD-AJSBUHFISA-N
SMILES
C[C@H]1CCCN(Cc2cc3c(c(C(F)(F)F)c2)CN(c2cc(C4(Cc5nncn5C)COC4)cc(N[C@H]4C[C@@H](N=[N+]=[N-])C4)n2)C3=O)C1
Aliases
BDBM775013 (preferred) BDBM775013 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q13191 CBLB;RNF56;Nbla00127
E3 ubiquitin-protein ligase CBL-B
reported_binder bindingdb_reported Yes No low BindingDB:BDBM775013 medium
; target=E3 ubiquitin-protein ligase CBL-B
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM775013 Open - 10.7270/Q26D5ZSD
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C[C@H]1CCCN(Cc2cc3c(c(C(F)(F)F)c2)CN(c2cc(C4(Cc5nncn5C)COC4)cc(N[C@H]4C[C@@H](N=[N+]=[N-])C4)n2)C3=O)C1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041586/BDB041586.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041586/BDB041586.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041586/BDB041586.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041586/BDB041586.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041586/BDB041586.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component
BindingDB:BDBM775013 IC50 12 nM High DOI: 10.7270/Q26D5ZSD 1
E3 ubiquitin-protein ligase CBL-B
Q13191
E3 ligase component
BindingDB:BDBM775013 IC50 550 nM Moderate DOI: 10.7270/Q26D5ZSD 1