< Back to small molecule database

BDBM775286

E3L041672
Internal ID: BDB041672
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB041672/BDB041672.sdf
Basic Properties
Compound ID
E3L041672
Internal ID
BDB041672
Molecular formula
C35H32F3N5O5
Molecular weight
659.665000
Exact mass
659.235554
XLogP
4.9236
TPSA
122.6300
HBA / HBD
6 / 2
Rotatable bonds
10
Heavy atoms / rings
48 / 5
Activity summary
IC50 unknown 2000.00000000 nM
2 activity record(s) imported
InChIKey
LLRSNJDTUUHSQQ-IHLOFXLRSA-N
SMILES
C=C(CC(=O)NCc1cccc([C@@H]2c3cnn(-c4ccccc4)c3N(CC)C(=O)[C@H]2NC(=O)c2cccc(C(F)(F)F)c2)c1)C(=O)OC
Aliases
BDBM775286 (preferred) BDBM775286 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM775286 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM775286 Open - 10.7270/Q25D8XN1
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C=C(CC(=O)NCc1cccc([C@@H]2c3cnn(-c4ccccc4)c3N(CC)C(=O)[C@H]2NC(=O)c2cccc(C(F)(F)F)c2)c1)C(=O)OC keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041672/BDB041672.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041672/BDB041672.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041672/BDB041672.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041672/BDB041672.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041672/BDB041672.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM775286 IC50 2000 nM Low DOI: 10.7270/Q25D8XN1 2 source records