< Back to small molecule database

BDBM775381

E3L041767
Internal ID: BDB041767
Activity data available Local docking-ready structure
Dock with Q96GG9
Structure
/e3_file/ligand_db/generated/BDB041767/BDB041767.sdf
Basic Properties
Compound ID
E3L041767
Internal ID
BDB041767
Molecular formula
C38H39F3N6O4
Molecular weight
700.762000
Exact mass
700.298488
XLogP
5.0828
TPSA
108.8000
HBA / HBD
6 / 2
Rotatable bonds
10
Heavy atoms / rings
51 / 6
Activity summary
IC50 < 200.00000000 nM
2 activity record(s) imported
InChIKey
IHITUCYTGXJSAW-JPKCQDGRSA-N
SMILES
C/C=C(\CN1CCOCC1)C(=O)NCc1cccc([C@@H]2c3cnn(-c4ccccc4)c3N(CC)C(=O)[C@H]2NC(=O)c2cccc(C(F)(F)F)c2)c1
Aliases
BDBM775381 (preferred) BDBM775381 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96GG9 DCUN1D1;DCN1;DCUN1L1;RP42;SCCRO
DCN1-like protein 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM775381 medium
; target=DCN1-like protein 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM775381 Open - 10.7270/Q25D8XN1
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C/C=C(\CN1CCOCC1)C(=O)NCc1cccc([C@@H]2c3cnn(-c4ccccc4)c3N(CC)C(=O)[C@H]2NC(=O)c2cccc(C(F)(F)F)c2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041767/BDB041767.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041767/BDB041767.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041767/BDB041767.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041767/BDB041767.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041767/BDB041767.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM775381 IC50 <200 nM Uncertain DOI: 10.7270/Q25D8XN1 1
DCN1-like protein 1
Q96GG9
E3 ligase component 		BindingDB:BDBM775381 IC50 2000 nM Low DOI: 10.7270/Q25D8XN1 1