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US12441708, Example 6

E3L041948
Internal ID: BDB041948
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB041948/BDB041948.sdf
Basic Properties
Compound ID
E3L041948
Internal ID
BDB041948
Molecular formula
C14H10F4N2O3
Molecular weight
330.237000
Exact mass
330.062755
XLogP
1.6312
TPSA
66.4800
HBA / HBD
3 / 1
Rotatable bonds
1
Heavy atoms / rings
23 / 3
Activity summary
Kd > 100000.00000000 nM
1 activity record(s) imported
InChIKey
XGBJNZAYJGGZTH-UHFFFAOYSA-N
SMILES
O=C1NC(C(F)(F)F)CCC1N1C(=O)c2cccc(F)c2C1=O
Aliases
BDBM777352 (preferred) US12441708, Example 6 (source_name) BDBM777352 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM777352 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM777352 Open - 10.7270/Q2TX3M4R
PubChem CID135273263 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1NC(C(F)(F)F)CCC1N1C(=O)c2cccc(F)c2C1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041948/BDB041948.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041948/BDB041948.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041948/BDB041948.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041948/BDB041948.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041948/BDB041948.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM777352 Kd >100000 nM Low DOI: 10.7270/Q2TX3M4R 1