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US12441708, Example 7

E3L041949
Internal ID: BDB041949
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB041949/BDB041949.sdf
Basic Properties
Compound ID
E3L041949
Internal ID
BDB041949
Molecular formula
C14H6F4N2O3
Molecular weight
326.205000
Exact mass
326.031455
XLogP
2.3334
TPSA
70.2400
HBA / HBD
3 / 1
Rotatable bonds
1
Heavy atoms / rings
23 / 3
Activity summary
Kd > 100000.00000000 nM
1 activity record(s) imported
InChIKey
JLSGUCYBGYXRAC-UHFFFAOYSA-N
SMILES
O=C1c2cccc(F)c2C(=O)N1c1ccc(C(F)(F)F)[nH]c1=O
Aliases
BDBM777353 (preferred) US12441708, Example 7 (source_name) BDBM777353 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM777353 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM777353 Open - 10.7270/Q2TX3M4R
PubChem CID135273264 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1c2cccc(F)c2C(=O)N1c1ccc(C(F)(F)F)[nH]c1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041949/BDB041949.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041949/BDB041949.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041949/BDB041949.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041949/BDB041949.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041949/BDB041949.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM777353 Kd >100000 nM Low DOI: 10.7270/Q2TX3M4R 1