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US12441708, Example 11

E3L041951
Internal ID: BDB041951
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB041951/BDB041951.sdf
Basic Properties
Compound ID
E3L041951
Internal ID
BDB041951
Molecular formula
C14H18N4O3
Molecular weight
290.323000
Exact mass
290.137890
XLogP
0.4000
TPSA
90.5400
HBA / HBD
4 / 3
Rotatable bonds
5
Heavy atoms / rings
21 / 2
Activity summary
Kd > 100000.00000000 nM
1 activity record(s) imported
InChIKey
XBZPRBLRGAMSJY-UHFFFAOYSA-N
SMILES
CNc1ccccc1C(=O)NCCN1C(=O)CCNC1=O
Aliases
BDBM777357 (preferred) US12441708, Example 11 (source_name) BDBM777357 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM777357 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM777357 Open - 10.7270/Q2TX3M4R
PubChem CID135273268 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CNc1ccccc1C(=O)NCCN1C(=O)CCNC1=O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041951/BDB041951.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041951/BDB041951.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041951/BDB041951.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041951/BDB041951.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041951/BDB041951.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM777357 Kd >100000 nM Low DOI: 10.7270/Q2TX3M4R 1