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US12441708, Example 14

E3L041952
Internal ID: BDB041952
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB041952/BDB041952.sdf
Basic Properties
Compound ID
E3L041952
Internal ID
BDB041952
Molecular formula
C15H14N2O4
Molecular weight
286.287000
Exact mass
286.095357
XLogP
0.3302
TPSA
75.7100
HBA / HBD
4 / 1
Rotatable bonds
1
Heavy atoms / rings
21 / 4
Activity summary
Kd > 100000.00000000 nM
1 activity record(s) imported
InChIKey
OZCIXBUKIVTJKJ-UHFFFAOYSA-N
SMILES
O=C1CCC(N2C(=O)c3ccccc3C2=O)C2(COC2)N1
Aliases
BDBM777360 (preferred) US12441708, Example 14 (source_name) BDBM777360 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM777360 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM777360 Open - 10.7270/Q2TX3M4R
PubChem CID102104623 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1CCC(N2C(=O)c3ccccc3C2=O)C2(COC2)N1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041952/BDB041952.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041952/BDB041952.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041952/BDB041952.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041952/BDB041952.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041952/BDB041952.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM777360 Kd >100000 nM Low DOI: 10.7270/Q2TX3M4R 1