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US12441708, Example 24

E3L041960
Internal ID: BDB041960
Activity data available Local docking-ready structure
Dock with Q96SW2
Structure
/e3_file/ligand_db/generated/BDB041960/BDB041960.sdf
Basic Properties
Compound ID
E3L041960
Internal ID
BDB041960
Molecular formula
C11H6FN3O4
Molecular weight
263.184000
Exact mass
263.034234
XLogP
-0.4128
TPSA
95.5800
HBA / HBD
4 / 2
Rotatable bonds
1
Heavy atoms / rings
19 / 3
Activity summary
Kd > 100000.00000000 nM
1 activity record(s) imported
InChIKey
WSOTZYTXQNZMRG-UHFFFAOYSA-N
SMILES
O=C1NC(=O)C(N2C(=O)c3cccc(F)c3C2=O)N1
Aliases
BDBM777370 (preferred) US12441708, Example 24 (source_name) BDBM777370 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q96SW2 CRBN;AD-006
Protein cereblon
reported_binder bindingdb_reported Yes No low BindingDB:BDBM777370 medium
; target=Protein cereblon
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM777370 Open - 10.7270/Q2TX3M4R
PubChem CID135279349 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C1NC(=O)C(N2C(=O)c3cccc(F)c3C2=O)N1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB041960/BDB041960.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB041960/BDB041960.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB041960/BDB041960.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB041960/BDB041960.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB041960/BDB041960.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Protein cereblon
Q96SW2
E3 ligase component
BindingDB:BDBM777370 Kd >100000 nM Low DOI: 10.7270/Q2TX3M4R 1