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US12459899, Example 18

E3L042471
Internal ID: BDB042471
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042471/BDB042471.sdf
Basic Properties
Compound ID
E3L042471
Internal ID
BDB042471
Molecular formula
C24H26FN3O3
Molecular weight
423.488000
Exact mass
423.195820
XLogP
3.2086
TPSA
65.6400
HBA / HBD
5 / 1
Rotatable bonds
6
Heavy atoms / rings
31 / 4
Activity summary
IC50 < 1.00000000 nM
1 activity record(s) imported
InChIKey
XCXKXBIUCFNSIY-UHFFFAOYSA-N
SMILES
COC(=O)c1cccc(N2CCN(CCCc3cc4ccc(F)cc4c(=O)[nH]3)CC2)c1
Aliases
BDBM783929 (preferred) US12459899, Example 18 (source_name) BDBM783929 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM783929 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM783929 Open - 10.7270/Q27W6J0N
PubChem CID156318028 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC(=O)c1cccc(N2CCN(CCCc3cc4ccc(F)cc4c(=O)[nH]3)CC2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042471/BDB042471.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042471/BDB042471.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042471/BDB042471.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042471/BDB042471.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042471/BDB042471.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM783929 IC50 <1 nM Very high DOI: 10.7270/Q27W6J0N 1