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US12459899, Example 20

E3L042473
Internal ID: BDB042473
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042473/BDB042473.sdf
Basic Properties
Compound ID
E3L042473
Internal ID
BDB042473
Molecular formula
C24H27FN4O2
Molecular weight
422.504000
Exact mass
422.211804
XLogP
3.3804
TPSA
68.4400
HBA / HBD
4 / 2
Rotatable bonds
6
Heavy atoms / rings
31 / 4
Activity summary
IC50 < 1.00000000 nM
1 activity record(s) imported
InChIKey
ZRZLUBXLHJUHQM-UHFFFAOYSA-N
SMILES
CC(=O)Nc1cccc(N2CCN(CCCc3cc4ccc(F)cc4c(=O)[nH]3)CC2)c1
Aliases
BDBM783931 (preferred) US12459899, Example 20 (source_name) BDBM783931 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM783931 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM783931 Open - 10.7270/Q27W6J0N
PubChem CID156318276 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(=O)Nc1cccc(N2CCN(CCCc3cc4ccc(F)cc4c(=O)[nH]3)CC2)c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042473/BDB042473.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042473/BDB042473.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042473/BDB042473.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042473/BDB042473.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042473/BDB042473.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM783931 IC50 <1 nM Very high DOI: 10.7270/Q27W6J0N 1