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US12459899, Example 36

E3L042486
Internal ID: BDB042486
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042486/BDB042486.sdf
Basic Properties
Compound ID
E3L042486
Internal ID
BDB042486
Molecular formula
C23H24FN5O
Molecular weight
405.477000
Exact mass
405.196489
XLogP
2.9971
TPSA
76.0200
HBA / HBD
5 / 1
Rotatable bonds
5
Heavy atoms / rings
30 / 4
Activity summary
IC50 unknown 0.65000000 nM
1 activity record(s) imported
InChIKey
OZICUJMMRKQTDU-UHFFFAOYSA-N
SMILES
Cc1cc(F)cc2c(=O)[nH]c(CCCN3CCN(c4ccc(C#N)cn4)CC3)cc12
Aliases
BDBM783947 (preferred) US12459899, Example 36 (source_name) BDBM783947 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM783947 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM783947 Open - 10.7270/Q27W6J0N
PubChem CID156318298 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(F)cc2c(=O)[nH]c(CCCN3CCN(c4ccc(C#N)cn4)CC3)cc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042486/BDB042486.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042486/BDB042486.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042486/BDB042486.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042486/BDB042486.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042486/BDB042486.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM783947 IC50 0.65 nM Very high DOI: 10.7270/Q27W6J0N 1