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US12459899, Example 86

E3L042525
Internal ID: BDB042525
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042525/BDB042525.sdf
Basic Properties
Compound ID
E3L042525
Internal ID
BDB042525
Molecular formula
C22H19F2N3O2
Molecular weight
395.409000
Exact mass
395.144533
XLogP
3.4498
TPSA
66.0600
HBA / HBD
3 / 1
Rotatable bonds
4
Heavy atoms / rings
29 / 4
Activity summary
IC50 < 1.00000000 nM
1 activity record(s) imported
InChIKey
YYBZZFAZAQMPQK-UHFFFAOYSA-N
SMILES
O=C(CCc1cc2cccc(F)c2c(=O)[nH]1)N1CC=C(c2ccc(F)cn2)CC1
Aliases
BDBM783995 (preferred) US12459899, Example 86 (source_name) BDBM783995 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM783995 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM783995 Open - 10.7270/Q27W6J0N
PubChem CID156318278 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(CCc1cc2cccc(F)c2c(=O)[nH]1)N1CC=C(c2ccc(F)cn2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042525/BDB042525.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042525/BDB042525.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042525/BDB042525.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042525/BDB042525.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042525/BDB042525.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM783995 IC50 <1 nM Very high DOI: 10.7270/Q27W6J0N 1