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US12459899, Example 93

E3L042531
Internal ID: BDB042531
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042531/BDB042531.sdf
Basic Properties
Compound ID
E3L042531
Internal ID
BDB042531
Molecular formula
C23H19FN4O2
Molecular weight
402.429000
Exact mass
402.149204
XLogP
3.1824
TPSA
89.8500
HBA / HBD
4 / 1
Rotatable bonds
4
Heavy atoms / rings
30 / 4
Activity summary
IC50 < 1.00000000 nM
1 activity record(s) imported
InChIKey
KZLUNUQMUKIERK-UHFFFAOYSA-N
SMILES
N#Cc1ccc(C2=CCN(C(=O)CCc3cc4cccc(F)c4c(=O)[nH]3)CC2)cn1
Aliases
BDBM784001 (preferred) US12459899, Example 93 (source_name) BDBM784001 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM784001 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM784001 Open - 10.7270/Q27W6J0N
PubChem CID156318236 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready N#Cc1ccc(C2=CCN(C(=O)CCc3cc4cccc(F)c4c(=O)[nH]3)CC2)cn1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042531/BDB042531.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042531/BDB042531.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042531/BDB042531.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042531/BDB042531.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042531/BDB042531.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM784001 IC50 <1 nM Very high DOI: 10.7270/Q27W6J0N 1