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US12459899, Example 170

E3L042602
Internal ID: BDB042602
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042602/BDB042602.sdf
Basic Properties
Compound ID
E3L042602
Internal ID
BDB042602
Molecular formula
C23H28FN3O3
Molecular weight
413.493000
Exact mass
413.211470
XLogP
2.8509
TPSA
73.4800
HBA / HBD
3 / 1
Rotatable bonds
4
Heavy atoms / rings
30 / 4
Activity summary
IC50 < 1.00000000 nM
1 activity record(s) imported
InChIKey
GGTVQYKAIKCWHZ-UHFFFAOYSA-N
SMILES
O=C(CCc1cc2cccc(F)c2c(=O)[nH]1)N1CCN(C(=O)C2CCCCC2)CC1
Aliases
BDBM784077 (preferred) US12459899, Example 170 (source_name) BDBM784077 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM784077 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM784077 Open - 10.7270/Q27W6J0N
PubChem CID156318467 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(CCc1cc2cccc(F)c2c(=O)[nH]1)N1CCN(C(=O)C2CCCCC2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042602/BDB042602.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042602/BDB042602.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042602/BDB042602.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042602/BDB042602.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042602/BDB042602.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM784077 IC50 <1 nM Very high DOI: 10.7270/Q27W6J0N 1