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US12459899, Example 201

E3L042631
Internal ID: BDB042631
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042631/BDB042631.sdf
Basic Properties
Compound ID
E3L042631
Internal ID
BDB042631
Molecular formula
C25H27ClFN3O
Molecular weight
439.962000
Exact mass
439.182668
XLogP
4.9148
TPSA
39.3400
HBA / HBD
3 / 1
Rotatable bonds
5
Heavy atoms / rings
31 / 5
Activity summary
IC50 < 1.00000000 nM
1 activity record(s) imported
InChIKey
SWELBGCJGKNNET-UHFFFAOYSA-N
SMILES
Cc1ccc(F)c2c(=O)[nH]c(CCCN3C4CCC3CN(c3ccc(Cl)cc3)C4)cc12
Aliases
BDBM784108 (preferred) US12459899, Example 201 (source_name) BDBM784108 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM784108 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM784108 Open - 10.7270/Q27W6J0N
PubChem CID156318010 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1ccc(F)c2c(=O)[nH]c(CCCN3C4CCC3CN(c3ccc(Cl)cc3)C4)cc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042631/BDB042631.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042631/BDB042631.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042631/BDB042631.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042631/BDB042631.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042631/BDB042631.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM784108 IC50 <1 nM Very high DOI: 10.7270/Q27W6J0N 1