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US12459899, Example 227

E3L042657
Internal ID: BDB042657
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042657/BDB042657.sdf
Basic Properties
Compound ID
E3L042657
Internal ID
BDB042657
Molecular formula
C20H22FN5O
Molecular weight
367.428000
Exact mass
367.180839
XLogP
2.2120
TPSA
65.1200
HBA / HBD
5 / 1
Rotatable bonds
5
Heavy atoms / rings
27 / 4
Activity summary
IC50 < 1.00000000 nM
1 activity record(s) imported
InChIKey
HWCQDTSDELPKAO-UHFFFAOYSA-N
SMILES
O=c1[nH]c(CCCN2CCN(c3ccnc(F)c3)CC2)cc2ncccc12
Aliases
BDBM784134 (preferred) US12459899, Example 227 (source_name) BDBM784134 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM784134 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM784134 Open - 10.7270/Q27W6J0N
PubChem CID156318339 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=c1[nH]c(CCCN2CCN(c3ccnc(F)c3)CC2)cc2ncccc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042657/BDB042657.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042657/BDB042657.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042657/BDB042657.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042657/BDB042657.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042657/BDB042657.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM784134 IC50 <1 nM Very high DOI: 10.7270/Q27W6J0N 1