< Back to small molecule database

US12459899, Example 263

E3L042691
Internal ID: BDB042691
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042691/BDB042691.sdf
Basic Properties
Compound ID
E3L042691
Internal ID
BDB042691
Molecular formula
C24H25ClFN3O2
Molecular weight
441.934000
Exact mass
441.161933
XLogP
4.6647
TPSA
65.2000
HBA / HBD
3 / 2
Rotatable bonds
5
Heavy atoms / rings
31 / 4
Activity summary
IC50 < 1.00000000 nM
1 activity record(s) imported
InChIKey
YTXQXXIWXMDSOO-UHFFFAOYSA-N
SMILES
Cc1cc(F)cc2c(=O)[nH]c(CCC(=O)N3CCC(Nc4ccc(Cl)cc4)CC3)cc12
Aliases
BDBM784170 (preferred) US12459899, Example 263 (source_name) BDBM784170 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM784170 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM784170 Open - 10.7270/Q27W6J0N
PubChem CID156318329 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(F)cc2c(=O)[nH]c(CCC(=O)N3CCC(Nc4ccc(Cl)cc4)CC3)cc12 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042691/BDB042691.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042691/BDB042691.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042691/BDB042691.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042691/BDB042691.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042691/BDB042691.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM784170 IC50 <1 nM Very high DOI: 10.7270/Q27W6J0N 1