< Back to small molecule database

US12459899, Example 267

E3L042695
Internal ID: BDB042695
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB042695/BDB042695.sdf
Basic Properties
Compound ID
E3L042695
Internal ID
BDB042695
Molecular formula
C26H28FN3O4
Molecular weight
465.525000
Exact mass
465.206385
XLogP
3.7979
TPSA
91.5000
HBA / HBD
5 / 2
Rotatable bonds
6
Heavy atoms / rings
34 / 4
Activity summary
IC50 < 1.00000000 nM
1 activity record(s) imported
InChIKey
JPALQUQYNLRZHC-UHFFFAOYSA-N
SMILES
COC(=O)c1ccc(NC2CCN(C(=O)CCc3cc4c(C)cc(F)cc4c(=O)[nH]3)CC2)cc1
Aliases
BDBM784174 (preferred) US12459899, Example 267 (source_name) BDBM784174 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1
reported_binder bindingdb_reported Yes No low BindingDB:BDBM784174 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM784174 Open - 10.7270/Q27W6J0N
PubChem CID156318100 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COC(=O)c1ccc(NC2CCN(C(=O)CCc3cc4c(C)cc(F)cc4c(=O)[nH]3)CC2)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB042695/BDB042695.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB042695/BDB042695.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB042695/BDB042695.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB042695/BDB042695.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB042695/BDB042695.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component
BindingDB:BDBM784174 IC50 <1 nM Very high DOI: 10.7270/Q27W6J0N 1