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BDBM788175

E3L043046
Internal ID: BDB043046
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB043046/BDB043046.sdf
Basic Properties
Compound ID
E3L043046
Internal ID
BDB043046
Molecular formula
C25H32N8O
Molecular weight
460.586000
Exact mass
460.269908
XLogP
2.8656
TPSA
103.8100
HBA / HBD
7 / 4
Rotatable bonds
7
Heavy atoms / rings
34 / 6
Activity summary
IC50 unknown 859.00000000 nM
1 activity record(s) imported
InChIKey
SKSYGGOBCXCRNA-NQIIRXRSSA-N
SMILES
Cc1cc(C)n2cc(CNc3cc(NC[C@H]4CCNC[C@@H]4O)nc4c(C5CC5)cnn34)nc2c1
Aliases
BDBM788175 (preferred) (3R,4R)-4-[[[3-cyclopropyl-7-[(5,7-dimethylimidazo[1,2-a]pyridin-2-yl)methylamino]pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol (source_name) BDBM788175 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM788175 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM788175 Open - 10.7270/Q2BC44B5
PubChem CID156525068 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(C)n2cc(CNc3cc(NC[C@H]4CCNC[C@@H]4O)nc4c(C5CC5)cnn34)nc2c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB043046/BDB043046.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB043046/BDB043046.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB043046/BDB043046.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB043046/BDB043046.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB043046/BDB043046.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM788175 IC50 859 nM Moderate DOI: 10.7270/Q2BC44B5 1