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BDBM788186

E3L043057
Internal ID: BDB043057
Activity data available Local docking-ready structure
Dock with P51948
Structure
/e3_file/ligand_db/generated/BDB043057/BDB043057.sdf
Basic Properties
Compound ID
E3L043057
Internal ID
BDB043057
Molecular formula
C24H33N9O
Molecular weight
463.590000
Exact mass
463.280807
XLogP
2.5066
TPSA
116.7000
HBA / HBD
8 / 4
Rotatable bonds
7
Heavy atoms / rings
34 / 5
Activity summary
IC50 unknown 484.00000000 nM
1 activity record(s) imported
InChIKey
ZRVMIIBSDSMIEO-XLIONFOSSA-N
SMILES
Cc1cc(C)n2cc(CNc3cc(NC[C@H]4CCNC[C@@H]4O)nc4c(C(C)C)cnn34)nc2n1
Aliases
BDBM788186 (preferred) (3R,4R)-4-[[[7-[(5,7-dimethylimidazo[1,2-a]pyrimidin-2-yl)methylamino]-3-propan-2-ylpyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol (source_name) BDBM788186 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P51948 MNAT1;CAP35;MAT1;RNF66
CDK-activating kinase assembly factor MAT1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM788186 medium
; target=Cyclin-H
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM788186 Open - 10.7270/Q2BC44B5
PubChem CID156525069 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(C)n2cc(CNc3cc(NC[C@H]4CCNC[C@@H]4O)nc4c(C(C)C)cnn34)nc2n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB043057/BDB043057.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB043057/BDB043057.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB043057/BDB043057.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB043057/BDB043057.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB043057/BDB043057.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Cyclin-H
P51948
E3 ligase component 		BindingDB:BDBM788186 IC50 484 nM Moderate DOI: 10.7270/Q2BC44B5 1