E3Docker 2.0

BDBM50006138

E3L043329

Internal ID: BDB043329

Activity data available Local docking-ready structure

Dock with P00797

Structure

/e3_file/ligand_db/generated/BDB043329/BDB043329.sdf

Basic Properties

Compound ID

E3L043329

Internal ID

BDB043329

Molecular formula

C35H50N4O6S

Molecular weight

654.874000

Exact mass

654.345106

XLogP

3.2821

TPSA

141.0900

HBA / HBD

8 / 4

Rotatable bonds

Heavy atoms / rings

46 / 5

Activity summary

IC50 unknown 0.70000000 nM
2 activity record(s) imported

InChIKey

VODBBWOBQAWRSZ-HXZLNTDVSA-N

SMILES

CC(C)C[C@H](O)[C@H](O)[C@H](CC1CCCCC1)NC(=O)[C@H](Cc1cscn1)NC(=O)[C@H]1[C@H](C(=O)N2CCOCC2)[C@@H]1c1ccccc1

Aliases

BDBM50006138 (preferred) BDBM50006138 (source_id)

E3 Relation

E3 UniProt	Gene / protein	Relation type	Ligand role	Direct	Functional	Docking	Source	Evidence
P00797	REN Renin	reported_binder	bindingdb_reported	Yes	No	low	BindingDB:BDBM50006138	medium ; target=Renin

Sources and Literature

Source	Source ID	Source URL	Download URL	DOI / PMID
BindingDB	BDBM50006138	Open	-	10.1021/jm00088a005 PMID: 1588553

Structure Files

Kind	Format	Status	Docking use	File / link	Preparation note
canonical_2d	SMILES	raw	Docking-ready	CC(C)C[C@H](O)[C@H](O)[C@H](CC1CCCCC1)NC(=O)[C@H](Cc1cscn1)NC(=O)[C@H]1[C@H](C(=O)N2CCOCC2)[C@@H]1c1ccccc1	keep_bindingdb_unique
generated_3d	SDF	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB043329/BDB043329.sdf	Generated from canonical SMILES
generated_3d	MOL2	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB043329/BDB043329.mol2	Generated from canonical SMILES
docking_ready	PDBQT	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB043329/BDB043329.pdbqt	Generated from canonical SMILES
image	PNG	prepared	Reference	public/e3_file/ligand_db/generated/BDB043329/BDB043329.png	Generated from canonical SMILES
image	SVG	prepared	Reference	public/e3_file/ligand_db/generated/BDB043329/BDB043329.svg	Generated from canonical SMILES

Activity

Target	Source	Assay	Result	Potency	Literature	Records
Renin P00797 E3 ligase component	BindingDB:BDBM50006138	IC50	0.7 nM	Very high	DOI: 10.1021/jm00088a005 PMID: 1588553	1
Renin P00797 E3 ligase component	BindingDB:BDBM50006138	IC50	20 nM	High	DOI: 10.1021/jm00088a005 PMID: 1588553	1