< Back to small molecule database

BDBM50007656

E3L043475
Internal ID: BDB043475
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB043475/BDB043475.sdf
Basic Properties
Compound ID
E3L043475
Internal ID
BDB043475
Molecular formula
C27H33Cl2NO6S
Molecular weight
570.535000
Exact mass
569.140564
XLogP
5.7158
TPSA
100.9800
HBA / HBD
5 / 1
Rotatable bonds
8
Heavy atoms / rings
37 / 3
Activity summary
IC50 unknown 2.00000000 nM
2 activity record(s) imported
InChIKey
RQNXTFPPWHDPDU-WMMXXEOUSA-N
SMILES
CC(C)[C@@H](CS(=O)(=O)C(C)(C)C)N1C(=O)[C@@H](CC(=O)O)O[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
Aliases
BDBM50007656 (preferred) 2-[(2R,5R,6R)-4-[(2S)-1-tert-butylsulfonyl-3-methylbutan-2-yl]-6-(3-chlorophenyl)-5-(4-chlorophenyl)-3-oxomorpholin-2-yl]acetic acid (source_name) BDBM50007656 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50007656 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50007656 Open - 10.1021/jm401767k PMID: 24548297
PubChem CID89480425 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC(C)[C@@H](CS(=O)(=O)C(C)(C)C)N1C(=O)[C@@H](CC(=O)O)O[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB043475/BDB043475.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB043475/BDB043475.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB043475/BDB043475.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB043475/BDB043475.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB043475/BDB043475.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM50007656 IC50 2.5 nM Very high DOI: 10.1021/jm401767k
PMID: 24548297
1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component
BindingDB:BDBM50007656 IC50 2 nM Very high DOI: 10.1021/jm401767k
PMID: 24548297
1