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BDBM50008758

E3L043533
Internal ID: BDB043533
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB043533/BDB043533.sdf
Basic Properties
Compound ID
E3L043533
Internal ID
BDB043533
Molecular formula
C29H37Cl2NO5S
Molecular weight
582.590000
Exact mass
581.176950
XLogP
6.0003
TPSA
91.7500
HBA / HBD
5 / 1
Rotatable bonds
9
Heavy atoms / rings
38 / 3
Activity summary
IC50 unknown 0.60000000 nM
2 activity record(s) imported
InChIKey
OCIDJOZAAORGQC-RRYSNUMESA-N
SMILES
CC[C@@H](CS(=O)(=O)C(C)(C)C)N1C(=O)[C@@](C)(CC(=O)CO)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1
Aliases
BDBM50008758 (preferred) (3R,5R,6S)-1-[(2S)-1-tert-butylsulfonylbutan-2-yl]-5-(3-chlorophenyl)-6-(4-chlorophenyl)-3-(3-hydroxy-2-oxopropyl)-3-methylpiperidin-2-one (source_name) BDBM50008758 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50008758 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50008758 Open - 10.1021/jm401911v PMID: 24601644
PubChem CID90655378 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CC[C@@H](CS(=O)(=O)C(C)(C)C)N1C(=O)[C@@](C)(CC(=O)CO)C[C@H](c2cccc(Cl)c2)[C@H]1c1ccc(Cl)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB043533/BDB043533.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB043533/BDB043533.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB043533/BDB043533.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB043533/BDB043533.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB043533/BDB043533.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50008758 IC50 0.6 nM Very high DOI: 10.1021/jm401911v
PMID: 24601644 		1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50008758 IC50 3.7 nM Very high DOI: 10.1021/jm401911v
PMID: 24601644 		1