< Back to small molecule database

BDBM50023123

E3L044469
Internal ID: BDB044469
Activity data available Local docking-ready structure
Dock with P00797
Structure
/e3_file/ligand_db/generated/BDB044469/BDB044469.sdf
Basic Properties
Compound ID
E3L044469
Internal ID
BDB044469
Molecular formula
C40H63N7O6
Molecular weight
737.987000
Exact mass
737.483983
XLogP
4.0394
TPSA
177.7800
HBA / HBD
8 / 6
Rotatable bonds
19
Heavy atoms / rings
53 / 3
Activity summary
IC50 unknown 5.00000000 nM
1 activity record(s) imported
InChIKey
WBGTXWUKERFWOG-CUPIEXAXSA-N
SMILES
C=C(C[C@H](O)[C@H](CC1CCCCC1)NC(=O)[C@H](Cc1c[nH]cn1)NC(=O)[C@H](Cc1ccccc1)NC(=O)OC(C)(C)C)C(=O)NCC(C)(C)CN(C)C
Aliases
BDBM50023123 (preferred) BDBM50023123 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P00797 REN
Renin
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50023123 medium
; target=Renin
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50023123 Open - 10.1021/jm00394a008 PMID: 3312604
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready C=C(C[C@H](O)[C@H](CC1CCCCC1)NC(=O)[C@H](Cc1c[nH]cn1)NC(=O)[C@H](Cc1ccccc1)NC(=O)OC(C)(C)C)C(=O)NCC(C)(C)CN(C)C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB044469/BDB044469.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB044469/BDB044469.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB044469/BDB044469.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB044469/BDB044469.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB044469/BDB044469.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Renin
P00797
E3 ligase component
BindingDB:BDBM50023123 IC50 5 nM Very high DOI: 10.1021/jm00394a008
PMID: 3312604
1