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BDBM50041074

E3L044792
Internal ID: BDB044792
Activity data available Local docking-ready structure
Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB044792/BDB044792.sdf
Basic Properties
Compound ID
E3L044792
Internal ID
BDB044792
Molecular formula
C29H32Cl2FN3O3
Molecular weight
560.497000
Exact mass
559.180475
XLogP
5.2006
TPSA
90.4600
HBA / HBD
4 / 4
Rotatable bonds
3
Heavy atoms / rings
38 / 6
Activity summary
Ki unknown 2.90000000 nM
2 activity record(s) imported
InChIKey
QQOSBFYZJBKRMS-UAKSBLKBSA-N
SMILES
O=C(N[C@H]1CC[C@H](O)CC1)[C@@H]1NC2(CCCCC2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F
Aliases
BDBM50041074 (preferred) BDBM50041074 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50041074 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50041074 Open - 10.1021/jm501541j PMID: 25496041
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(N[C@H]1CC[C@H](O)CC1)[C@@H]1NC2(CCCCC2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1cccc(Cl)c1F keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB044792/BDB044792.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB044792/BDB044792.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB044792/BDB044792.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB044792/BDB044792.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB044792/BDB044792.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50041074 IC50 17 nM High DOI: 10.1021/jm501541j
PMID: 25496041 		1
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50041074 Ki 2.9 nM Very high DOI: 10.1021/jm501541j
PMID: 25496041 		1