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BDBM50135456

E3L046463
Internal ID: BDB046463
Activity data available Local docking-ready structure
Dock with P37231
Structure
/e3_file/ligand_db/generated/BDB046463/BDB046463.sdf
Basic Properties
Compound ID
E3L046463
Internal ID
BDB046463
Molecular formula
C24H29F5O3
Molecular weight
460.483000
Exact mass
460.203686
XLogP
7.6334
TPSA
46.5300
HBA / HBD
2 / 1
Rotatable bonds
10
Heavy atoms / rings
32 / 1
Activity summary
EC50 unknown 7.40000000 nM
2 activity record(s) imported
InChIKey
UXAOHICPAFHSTJ-HYFQCHPWSA-N
SMILES
CCCCOc1c(\C(C)=C/C=C/C(C)=C/C(=O)O)cc(C(F)(F)C(F)(F)F)cc1C(C)C
Aliases
BDBM50135456 (preferred) (2E,4E,6Z)-7-(2-Butoxy-3-isopropyl-5-pentafluoroethyl-phenyl)-3-methyl-octa-2,4,6-trienoic acid (source_name) BDBM50135456 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50135456 medium
; target=Peroxisome proliferator-activated receptor gamma
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50135456 Open - 10.1016/j.bmcl.2003.08.048 PMID: 14592510
PubChem CID9847065 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCCCOc1c(\C(C)=C/C=C/C(C)=C/C(=O)O)cc(C(F)(F)C(F)(F)F)cc1C(C)C keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB046463/BDB046463.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB046463/BDB046463.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB046463/BDB046463.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB046463/BDB046463.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB046463/BDB046463.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50135456 EC50 7.4 nM Very high DOI: 10.1016/j.bmcl.2003.08.048
PMID: 14592510 		1
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50135456 EC50 71 nM High DOI: 10.1016/j.bmcl.2003.08.048
PMID: 14592510 		1