< Back to small molecule database

BDBM50145133

E3L046621
Internal ID: BDB046621
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB046621/BDB046621.sdf
Basic Properties
Compound ID
E3L046621
Internal ID
BDB046621
Molecular formula
C20H16FN5O
Molecular weight
361.380000
Exact mass
361.133888
XLogP
3.0944
TPSA
75.6000
HBA / HBD
4 / 2
Rotatable bonds
2
Heavy atoms / rings
27 / 5
Activity summary
IC50 unknown 2.10000000 nM
2 activity record(s) imported
InChIKey
JMRVJHACGJMVJK-UHFFFAOYSA-N
SMILES
Cn1ccnc1C1c2n[nH]c(=O)c3cc(F)cc(c23)NC1c1ccccc1
Aliases
BDBM50145133 (preferred) 7-Fluoro-12-(1-methylimidazol-2-yl)-11-phenyl-2,3,10-triazatricyclo[7.3.1.05,13]trideca-1,5(13),6,8-tetraen-4-one (source_name) BDBM50145133 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50145133 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50145133 Open - 10.1021/acs.jmedchem.5b01498 PMID: 26652717
PubChem CID136186302 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cn1ccnc1C1c2n[nH]c(=O)c3cc(F)cc(c23)NC1c1ccccc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB046621/BDB046621.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB046621/BDB046621.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB046621/BDB046621.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB046621/BDB046621.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB046621/BDB046621.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50145133 IC50 2.1 nM Very high DOI: 10.1021/acs.jmedchem.5b01498
PMID: 26652717 		1
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50145133 EC50 18 nM High DOI: 10.1021/acs.jmedchem.5b01498
PMID: 26652717 		1