| E3 UniProt | Gene / protein | Relation type | Ligand role | Direct | Functional | Docking | Source | Evidence |
|---|---|---|---|---|---|---|---|---|
| P41229 | KDM5C;DXS1272E;JARID1C;SMCX;XE169 Lysine-specific demethylase 5C |
reported_binder | bindingdb_reported | Yes | No | low | BindingDB:BDBM50153180 | medium ; target=Lysine-specific demethylase 5C |
| Kind | Format | Status | Docking use | File / link | Preparation note |
|---|---|---|---|---|---|
| canonical_2d | SMILES | raw | Docking-ready | NC(=O)c1ccnc(-c2csc(N)n2)c1 | keep_bindingdb_unique |
| generated_3d | SDF | prepared | Docking-ready | public/e3_file/ligand_db/generated/BDB046931/BDB046931.sdf | Generated from canonical SMILES |
| generated_3d | MOL2 | prepared | Docking-ready | public/e3_file/ligand_db/generated/BDB046931/BDB046931.mol2 | Generated from canonical SMILES |
| docking_ready | PDBQT | prepared | Docking-ready | public/e3_file/ligand_db/generated/BDB046931/BDB046931.pdbqt | Generated from canonical SMILES |
| image | PNG | prepared | Reference | public/e3_file/ligand_db/generated/BDB046931/BDB046931.png | Generated from canonical SMILES |
| image | SVG | prepared | Reference | public/e3_file/ligand_db/generated/BDB046931/BDB046931.svg | Generated from canonical SMILES |
| Target | Source | Assay | Result | Potency | Literature | Records |
|---|---|---|---|---|---|---|
|
Lysine-specific demethylase 5C P41229 E3 ligase component |
BindingDB:BDBM50153180 | IC50 | 6800 nM | Low |
DOI: 10.1021/acs.jmedchem.5b01635
PMID: 26741168 |
1 |