< Back to small molecule database

BDBM50177442

E3L047578
Internal ID: BDB047578
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB047578/BDB047578.sdf
Basic Properties
Compound ID
E3L047578
Internal ID
BDB047578
Molecular formula
C23H26N4O2
Molecular weight
390.487000
Exact mass
390.205576
XLogP
2.6817
TPSA
69.3000
HBA / HBD
4 / 1
Rotatable bonds
4
Heavy atoms / rings
29 / 4
Activity summary
IC50 unknown 15.00000000 nM
1 activity record(s) imported
InChIKey
OBAAVMRKGBJFGT-UHFFFAOYSA-N
SMILES
CCN1CCCN(C(=O)c2cccc(Cc3n[nH]c(=O)c4ccccc34)c2)CC1
Aliases
BDBM50177442 (preferred) 4-(3-(1-ethyl-1,4-diazepane-4-carbonyl)benzyl)phthalazin-1(2H)-one (source_name) BDBM50177442 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50177442 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50177442 Open - 10.1016/j.bmcl.2005.10.081 PMID: 16290932
PubChem CID44408064 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCN1CCCN(C(=O)c2cccc(Cc3n[nH]c(=O)c4ccccc34)c2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB047578/BDB047578.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB047578/BDB047578.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB047578/BDB047578.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB047578/BDB047578.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB047578/BDB047578.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50177442 IC50 15 nM High DOI: 10.1016/j.bmcl.2005.10.081
PMID: 16290932 		1