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BDBM50177454

E3L047589
Internal ID: BDB047589
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB047589/BDB047589.sdf
Basic Properties
Compound ID
E3L047589
Internal ID
BDB047589
Molecular formula
C27H30N4O3
Molecular weight
458.562000
Exact mass
458.231791
XLogP
3.3786
TPSA
86.3700
HBA / HBD
4 / 1
Rotatable bonds
4
Heavy atoms / rings
34 / 5
Activity summary
IC50 unknown 15.00000000 nM
1 activity record(s) imported
InChIKey
RKINOMQLJHXZPW-UHFFFAOYSA-N
SMILES
O=C(c1cccc(Cc2n[nH]c(=O)c3ccccc23)c1)N1CCC(C(=O)N2CCCCC2)CC1
Aliases
BDBM50177454 (preferred) 4-(3-(4-(piperidine-1-carbonyl)piperidine-1-carbonyl)benzyl)phthalazin-1(2H)-one (source_name) BDBM50177454 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50177454 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50177454 Open - 10.1016/j.bmcl.2005.10.081 PMID: 16290932
PubChem CID44407483 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(c1cccc(Cc2n[nH]c(=O)c3ccccc23)c1)N1CCC(C(=O)N2CCCCC2)CC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB047589/BDB047589.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB047589/BDB047589.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB047589/BDB047589.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB047589/BDB047589.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB047589/BDB047589.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50177454 IC50 15 nM High DOI: 10.1016/j.bmcl.2005.10.081
PMID: 16290932 		1