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BDBM50184651

E3L047785
Internal ID: BDB047785
Activity data available Local docking-ready structure
Dock with P37231 Dock with Q07869
Structure
/e3_file/ligand_db/generated/BDB047785/BDB047785.sdf
Basic Properties
Compound ID
E3L047785
Internal ID
BDB047785
Molecular formula
C28H20F6N2O4
Molecular weight
562.466000
Exact mass
562.132726
XLogP
7.1990
TPSA
81.5400
HBA / HBD
5 / 1
Rotatable bonds
8
Heavy atoms / rings
40 / 4
Activity summary
EC50 > 10000.00000000 nM
2 activity record(s) imported
InChIKey
REVAIOHTAHULEP-UHFFFAOYSA-N
SMILES
Cc1cc(OCc2nc(-c3ccc(C(F)(F)F)cc3)cc(-c3ccc(C(F)(F)F)cc3)n2)ccc1OCC(=O)O
Aliases
BDBM50184651 (preferred) {4-[4,6-Bis-(4-trifluoromethyl-phenyl)-pyrimidin-2-ylmethoxy]-2-methyl-phenoxy}-acetic acid (source_name) BDBM50184651 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50184651 medium
; target=Peroxisome proliferator-activated receptor gamma
Q07869 PPARA;NR1C1;PPAR
Peroxisome proliferator-activated receptor alpha		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50184651 medium
; target=Peroxisome proliferator-activated receptor alpha
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50184651 Open - 10.1016/j.bmcl.2006.02.079 PMID: 16546385
PubChem CID44411561 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1cc(OCc2nc(-c3ccc(C(F)(F)F)cc3)cc(-c3ccc(C(F)(F)F)cc3)n2)ccc1OCC(=O)O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB047785/BDB047785.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB047785/BDB047785.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB047785/BDB047785.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB047785/BDB047785.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB047785/BDB047785.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor alpha
Q07869
E3 ligase component 		BindingDB:BDBM50184651 EC50 >10000 nM Low DOI: 10.1016/j.bmcl.2006.02.079
PMID: 16546385 		1
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50184651 EC50 >10000 nM Low DOI: 10.1016/j.bmcl.2006.02.079
PMID: 16546385 		1