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BDBM50197611

E3L048245
Internal ID: BDB048245
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB048245/BDB048245.sdf
Basic Properties
Compound ID
E3L048245
Internal ID
BDB048245
Molecular formula
C24H20N4O3S
Molecular weight
444.516000
Exact mass
444.125611
XLogP
3.8431
TPSA
103.9500
HBA / HBD
5 / 3
Rotatable bonds
4
Heavy atoms / rings
32 / 6
Activity summary
IC50 unknown 56.00000000 nM
1 activity record(s) imported
InChIKey
NKJICQZOBWCZOQ-UHFFFAOYSA-N
SMILES
CCC(=O)NCc1nc(-c2ccc3[nH]c4c5c(c6c(c4c3c2)C(=O)NC6=O)CCC5)cs1
Aliases
BDBM50197611 (preferred) N-[[4-(8,10-dioxo-9,19-diazapentacyclo[10.7.0.02,6.07,11.013,18]nonadeca-1(12),2(6),7(11),13(18),14,16-hexaen-15-yl)-1,3-thiazol-2-yl]methyl]propanamide (source_name) BDBM50197611 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50197611 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50197611 Open - 10.1016/j.bmcl.2006.10.010 PMID: 17074482
PubChem CID44440332 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready CCC(=O)NCc1nc(-c2ccc3[nH]c4c5c(c6c(c4c3c2)C(=O)NC6=O)CCC5)cs1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB048245/BDB048245.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB048245/BDB048245.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB048245/BDB048245.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB048245/BDB048245.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB048245/BDB048245.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50197611 IC50 56 nM High DOI: 10.1016/j.bmcl.2006.10.010
PMID: 17074482 		1