E3Docker 2.0

< Back to small molecule database

BDBM50200378

E3L048319

Internal ID: BDB048319

Activity data available Local docking-ready structure

Dock with Q09472 Dock with Q92793

Structure

/e3_file/ligand_db/generated/BDB048319/BDB048319.sdf

Basic Properties

Compound ID

E3L048319

Internal ID

BDB048319

Molecular formula

C21H27N5O2

Molecular weight

381.480000

Exact mass

381.216475

XLogP

2.6910

TPSA

79.2600

HBA / HBD

4 / 2

Rotatable bonds

Heavy atoms / rings

28 / 4

Activity summary

IC50 unknown 40.00000000 nM
4 activity record(s) imported

InChIKey

NSRRDNGMQXSHPJ-UHFFFAOYSA-N

SMILES

CCNC(=O)c1cccc(Nc2nn(CC3CC3)c3c2CN(C(C)=O)CC3)c1

Aliases

BDBM50200378 (preferred) 3-[[5-acetyl-1-(cyclopropylmethyl)-6,7-dihydro-4H-pyrazolo[4,3-c]pyridin-3-yl]amino]-N-ethylbenzamide (source_name) BDBM50200378 (source_id)

E3 Relation

E3 UniProt	Gene / protein	Relation type	Ligand role	Direct	Functional	Docking	Source	Evidence
Q09472	EP300;P300 Histone acetyltransferase p300	reported_binder	bindingdb_reported	Yes	No	low	BindingDB:BDBM50200378	medium ; target=CREB-binding protein
Q92793	CREBBP;CBP CREB-binding protein	reported_binder	bindingdb_reported	Yes	No	low	BindingDB:BDBM50200378	medium ; target=CREB-binding protein

Sources and Literature

Source	Source ID	Source URL	Download URL	DOI / PMID
BindingDB	BDBM50200378	Open	-	10.1021/acs.jmedchem.6b01022 PMID: 27682507
PubChem	CID134135176	Open	-

Structure Files

Kind	Format	Status	Docking use	File / link	Preparation note
canonical_2d	SMILES	raw	Docking-ready	CCNC(=O)c1cccc(Nc2nn(CC3CC3)c3c2CN(C(C)=O)CC3)c1	keep_bindingdb_unique
generated_3d	SDF	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB048319/BDB048319.sdf	Generated from canonical SMILES
generated_3d	MOL2	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB048319/BDB048319.mol2	Generated from canonical SMILES
docking_ready	PDBQT	prepared	Docking-ready	public/e3_file/ligand_db/generated/BDB048319/BDB048319.pdbqt	Generated from canonical SMILES
image	PNG	prepared	Reference	public/e3_file/ligand_db/generated/BDB048319/BDB048319.png	Generated from canonical SMILES
image	SVG	prepared	Reference	public/e3_file/ligand_db/generated/BDB048319/BDB048319.svg	Generated from canonical SMILES

Activity

Target	Source	Assay	Result	Potency	Literature	Records
CREB-binding protein Q09472 E3 ligase component	BindingDB:BDBM50200378	IC50	40 nM	High	DOI: 10.1021/acs.jmedchem.6b01022 PMID: 27682507	1
CREB-binding protein Q92793 E3 ligase component	BindingDB:BDBM50200378	IC50	40 nM	High	DOI: 10.1021/acs.jmedchem.6b01022 PMID: 27682507	1
CREB-binding protein Q09472 E3 ligase component	BindingDB:BDBM50200378	IC50	1500 nM	Low	DOI: 10.1021/acs.jmedchem.6b01022 PMID: 27682507	1
CREB-binding protein Q92793 E3 ligase component	BindingDB:BDBM50200378	IC50	1500 nM	Low	DOI: 10.1021/acs.jmedchem.6b01022 PMID: 27682507	1