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BDBM50236017

E3L049280
Internal ID: BDB049280
Activity data available Local docking-ready structure
Dock with O75530
Structure
/e3_file/ligand_db/generated/BDB049280/BDB049280.sdf
Basic Properties
Compound ID
E3L049280
Internal ID
BDB049280
Molecular formula
C17H14N4O
Molecular weight
290.326000
Exact mass
290.116761
XLogP
3.6014
TPSA
55.3600
HBA / HBD
4 / 1
Rotatable bonds
4
Heavy atoms / rings
22 / 4
Activity summary
IC50 unknown 115.00000000 nM
2 activity record(s) imported
InChIKey
LLWMRHSBKUBVRZ-UHFFFAOYSA-N
SMILES
c1ccc(-c2cnc(NCc3ccco3)n3cncc23)cc1
Aliases
BDBM50236017 (preferred) N-(furan-2-ylmethyl)-8-phenylimidazo[1,5-c]pyrimidin-5-amine (source_name) BDBM50236017 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O75530 EED
Polycomb protein EED		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50236017 medium
; target=Polycomb protein EED
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50236017 Open - 10.1021/acs.jmedchem.6b01576; 10.1021/acs.jmedchem.0c00479 PMID: 28092155; 32580550
PubChem CID137639984 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready c1ccc(-c2cnc(NCc3ccco3)n3cncc23)cc1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB049280/BDB049280.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB049280/BDB049280.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB049280/BDB049280.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB049280/BDB049280.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB049280/BDB049280.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Polycomb protein EED
O75530
E3 ligase component 		BindingDB:BDBM50236017 IC50 260 nM Moderate DOI: 10.1021/acs.jmedchem.6b01576
PMID: 28092155 		1
Polycomb protein EED
O75530
E3 ligase component 		BindingDB:BDBM50236017 IC50 115 nM Moderate DOI: 10.1021/acs.jmedchem.0c00479
PMID: 32580550 		1