< Back to small molecule database

BDBM50238264

E3L049384
Internal ID: BDB049384
Activity data available Local docking-ready structure
Dock with Q92793
Structure
/e3_file/ligand_db/generated/BDB049384/BDB049384.sdf
Basic Properties
Compound ID
E3L049384
Internal ID
BDB049384
Molecular formula
C28H31N5O2
Molecular weight
469.589000
Exact mass
469.247775
XLogP
4.9068
TPSA
72.1100
HBA / HBD
5 / 1
Rotatable bonds
7
Heavy atoms / rings
35 / 6
Activity summary
IC50 unknown 740.00000000 nM
1 activity record(s) imported
InChIKey
OZXSCORMLCXALA-UHFFFAOYSA-N
SMILES
Cc1noc(C)c1-c1ccc2c(c1)nc(CCc1c[nH]c3ccccc13)n2CCN1CCOCC1
Aliases
BDBM50238264 (preferred) 4-[2-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-2-[2-(1H-indol-3-yl)ethyl]benzimidazol-1-yl]ethyl]morpholine (source_name) BDBM50238264 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
Q92793 CREBBP;CBP
CREB-binding protein		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50238264 medium
; target=CREB-binding protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50238264 Open - 10.1021/acs.jmedchem.6b01839 PMID: 28375629
PubChem CID137631784 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready Cc1noc(C)c1-c1ccc2c(c1)nc(CCc1c[nH]c3ccccc13)n2CCN1CCOCC1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB049384/BDB049384.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB049384/BDB049384.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB049384/BDB049384.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB049384/BDB049384.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB049384/BDB049384.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
CREB-binding protein
Q92793
E3 ligase component 		BindingDB:BDBM50238264 IC50 740 nM Moderate DOI: 10.1021/acs.jmedchem.6b01839
PMID: 28375629 		1