< Back to small molecule database

BDBM50241628

E3L049501
Internal ID: BDB049501
Activity data available Local docking-ready structure
Dock with O15151 Dock with Q00987
Structure
/e3_file/ligand_db/generated/BDB049501/BDB049501.sdf
Basic Properties
Compound ID
E3L049501
Internal ID
BDB049501
Molecular formula
C24H23NO4
Molecular weight
389.451000
Exact mass
389.162708
XLogP
3.7263
TPSA
86.6300
HBA / HBD
3 / 3
Rotatable bonds
8
Heavy atoms / rings
29 / 3
Activity summary
IC50 unknown 23.00000000 nM
2 activity record(s) imported
InChIKey
NTJVCYLHJRYAHT-QFIPXVFZSA-N
SMILES
O=C(CC(c1ccccc1)c1ccccc1)N[C@@H](Cc1ccc(O)cc1)C(=O)O
Aliases
BDBM50241628 (preferred) (2S)-2-(3,3-diphenylpropanoylamino)-3-(4-hydroxyphenyl)propanoic acid (source_name) BDBM50241628 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O15151 MDM4;MDMX
Protein Mdm4		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50241628 medium
; target=Protein Mdm4
Q00987 MDM2
E3 ubiquitin-protein ligase Mdm2		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50241628 medium
; target=E3 ubiquitin-protein ligase Mdm2
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50241628 Open - 10.1021/acs.jmedchem.7b00912 PMID: 28921985
PubChem CID137647313 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(CC(c1ccccc1)c1ccccc1)N[C@@H](Cc1ccc(O)cc1)C(=O)O keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB049501/BDB049501.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB049501/BDB049501.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB049501/BDB049501.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB049501/BDB049501.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB049501/BDB049501.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
E3 ubiquitin-protein ligase Mdm2
Q00987
E3 ligase component 		BindingDB:BDBM50241628 IC50 23 nM High DOI: 10.1021/acs.jmedchem.7b00912
PMID: 28921985 		1
Protein Mdm4
O15151
E3 ligase component 		BindingDB:BDBM50241628 IC50 215 nM Moderate DOI: 10.1021/acs.jmedchem.7b00912
PMID: 28921985 		1