< Back to small molecule database

BDBM50243930

E3L049559
Internal ID: BDB049559
Activity data available Local docking-ready structure
Dock with O14965
Structure
/e3_file/ligand_db/generated/BDB049559/BDB049559.sdf
Basic Properties
Compound ID
E3L049559
Internal ID
BDB049559
Molecular formula
C26H30N2O5
Molecular weight
450.535000
Exact mass
450.215472
XLogP
4.4803
TPSA
70.9500
HBA / HBD
5 / 1
Rotatable bonds
7
Heavy atoms / rings
33 / 4
Activity summary
IC50 unknown 30000.00000000 nM
1 activity record(s) imported
InChIKey
ZFKGDYZACMFEDS-UHFFFAOYSA-N
SMILES
COc1cc(C2=C(c3cn(COC(C)(C)C)c4ccccc34)CNC2=O)cc(OC)c1OC
Aliases
BDBM50243930 (preferred) 4-[1-(tert-Butoxymethyl)-1H-indol-3-yl]-3-(3,4,5-trimethoxyphenyl)-1,5-dihydro-2H-pyrrole-2-one (source_name) BDBM50243930 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O14965 AURKA;AIK;AIRK1;ARK1;AURA;AYK1;BTAK;IAK1;STK15;STK6
Aurora kinase A
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50243930 medium
; target=Aurora kinase A
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50243930 Open - 10.1021/jm8001185 PMID: 18529047
PubChem CID24894992 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready COc1cc(C2=C(c3cn(COC(C)(C)C)c4ccccc34)CNC2=O)cc(OC)c1OC keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB049559/BDB049559.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB049559/BDB049559.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB049559/BDB049559.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB049559/BDB049559.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB049559/BDB049559.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Aurora kinase A
O14965
E3 ligase component
BindingDB:BDBM50243930 IC50 30000 nM Low DOI: 10.1021/jm8001185
PMID: 18529047
1