< Back to small molecule database

BDBM50264471

E3L050316
Internal ID: BDB050316
Activity data available Local docking-ready structure
Dock with O95630
Structure
/e3_file/ligand_db/generated/BDB050316/BDB050316.sdf
Basic Properties
Compound ID
E3L050316
Internal ID
BDB050316
Molecular formula
C28H20N6O2S4
Molecular weight
600.776000
Exact mass
600.053058
XLogP
6.3554
TPSA
109.7600
HBA / HBD
10 / 2
Rotatable bonds
9
Heavy atoms / rings
40 / 6
Activity summary
IC50 unknown 7800.00000000 nM
1 activity record(s) imported
InChIKey
GAKYIVFGFVBUQD-UHFFFAOYSA-N
SMILES
O=C(NCc1nccs1)c1cnc2c(SSc3cccc4cc(C(=O)NCc5nccs5)cnc34)cccc2c1
Aliases
BDBM50264471 (preferred) N-(1,3-thiazol-2-ylmethyl)-8-[[3-(1,3-thiazol-2-ylmethylcarbamoyl)quinolin-8-yl]disulfanyl]quinoline-3-carboxamide (source_name) BDBM50264471 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
O95630 STAMBP;AMSH
STAM-binding protein
reported_binder bindingdb_reported Yes No low BindingDB:BDBM50264471 medium
; target=STAM-binding protein
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50264471 Open - 10.1021/acs.jmedchem.6b01379 PMID: 28191850
PubChem CID126599619 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(NCc1nccs1)c1cnc2c(SSc3cccc4cc(C(=O)NCc5nccs5)cnc34)cccc2c1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB050316/BDB050316.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB050316/BDB050316.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB050316/BDB050316.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB050316/BDB050316.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB050316/BDB050316.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
STAM-binding protein
O95630
E3 ligase component
BindingDB:BDBM50264471 IC50 7800 nM Low DOI: 10.1021/acs.jmedchem.6b01379
PMID: 28191850
1