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BDBM50272902

E3L050599
Internal ID: BDB050599
Activity data available Local docking-ready structure
Dock with P37231
Structure
/e3_file/ligand_db/generated/BDB050599/BDB050599.sdf
Basic Properties
Compound ID
E3L050599
Internal ID
BDB050599
Molecular formula
C19H13FO4
Molecular weight
324.307000
Exact mass
324.079787
XLogP
3.9362
TPSA
74.6000
HBA / HBD
2 / 2
Rotatable bonds
4
Heavy atoms / rings
24 / 3
Activity summary
EC50 > 10000.00000000 nM
1 activity record(s) imported
InChIKey
ZKMYIZMNTQPMDC-NTUHNPAUSA-N
SMILES
O=C(O)CC1=C/C(=C\c2ccc(C(=O)O)cc2)c2ccc(F)cc21
Aliases
BDBM50272902 (preferred) (E)-4-((3-(Carboxymethyl)-5-fluoro-1H-inden-1-ylidene)methyl)-benzoic acid (source_name) BDBM50272902 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P37231 PPARG;NR1C3
Peroxisome proliferator-activated receptor gamma		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50272902 medium
; target=Peroxisome proliferator-activated receptor gamma
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50272902 Open - 10.1021/jm700969c PMID: 18665581
PubChem CID25034259 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready O=C(O)CC1=C/C(=C\c2ccc(C(=O)O)cc2)c2ccc(F)cc21 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB050599/BDB050599.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB050599/BDB050599.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB050599/BDB050599.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB050599/BDB050599.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB050599/BDB050599.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Peroxisome proliferator-activated receptor gamma
P37231
E3 ligase component 		BindingDB:BDBM50272902 EC50 >10000 nM Low DOI: 10.1021/jm700969c
PMID: 18665581 		1