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BDBM50276699

E3L050733
Internal ID: BDB050733
Activity data available Local docking-ready structure
Dock with P09874
Structure
/e3_file/ligand_db/generated/BDB050733/BDB050733.sdf
Basic Properties
Compound ID
E3L050733
Internal ID
BDB050733
Molecular formula
C26H20F2N6O2
Molecular weight
486.482000
Exact mass
486.161580
XLogP
3.0212
TPSA
105.9800
HBA / HBD
6 / 1
Rotatable bonds
4
Heavy atoms / rings
36 / 5
Activity summary
IC50 unknown 5.10000000 nM
1 activity record(s) imported
InChIKey
YBRFASBDVAVMNI-UHFFFAOYSA-N
SMILES
N#Cc1cccc(N2CCN(C(=O)c3cc(Cc4n[nH]c(=O)c5ccccc45)cc(F)c3F)CC2)n1
Aliases
BDBM50276699 (preferred) 6-[4-[2,3-difluoro-5-[(4-oxo-3H-phthalazin-1-yl)methyl]benzoyl]piperazin-1-yl]pyridine-2-carbonitrile (source_name) BDBM50276699 (source_id)
E3 Relation
E3 UniProt Gene / protein Relation type Ligand role Direct Functional Docking Source Evidence
P09874 PARP1;ADPRT;PPOL
Poly [ADP-ribose] polymerase 1		 reported_binder bindingdb_reported Yes No low BindingDB:BDBM50276699 medium
; target=Poly [ADP-ribose] polymerase 1
Sources and Literature
Source Source ID Source URL Download URL DOI / PMID
BindingDB BDBM50276699 Open - 10.1016/j.ejmech.2017.06.053 PMID: 28692916
PubChem CID145956805 Open -
Structure Files
Kind Format Status Docking use File / link Preparation note
canonical_2d SMILES raw Docking-ready N#Cc1cccc(N2CCN(C(=O)c3cc(Cc4n[nH]c(=O)c5ccccc45)cc(F)c3F)CC2)n1 keep_bindingdb_unique
generated_3d SDF prepared Docking-ready public/e3_file/ligand_db/generated/BDB050733/BDB050733.sdf Generated from canonical SMILES
generated_3d MOL2 prepared Docking-ready public/e3_file/ligand_db/generated/BDB050733/BDB050733.mol2 Generated from canonical SMILES
docking_ready PDBQT prepared Docking-ready public/e3_file/ligand_db/generated/BDB050733/BDB050733.pdbqt Generated from canonical SMILES
image PNG prepared Reference public/e3_file/ligand_db/generated/BDB050733/BDB050733.png Generated from canonical SMILES
image SVG prepared Reference public/e3_file/ligand_db/generated/BDB050733/BDB050733.svg Generated from canonical SMILES
Activity
Target Source Assay Result Potency Literature Records
Poly [ADP-ribose] polymerase 1
P09874
E3 ligase component 		BindingDB:BDBM50276699 IC50 5.1 nM Very high DOI: 10.1016/j.ejmech.2017.06.053
PMID: 28692916 		1